Transcript: ENST00000547113.1 PRICKLE1-002

Description

prickle homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:17019]

Gene Synonyms

EPM1B, FLJ31937, RILP

Location

Chromosome 12: 42,863,307-42,983,478 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 49346 variant alleles and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSG00000139174.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000455697.1	PRICKLE1-201	4253	831aa	ENSP00000401060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8742	F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4 Q96MT3	NM_001144883.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445766.2	PRICKLE1-005	4080	831aa	ENSP00000398947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8742	F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4 Q96MT3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548696.1	PRICKLE1-003	3584	831aa	ENSP00000448359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8742	F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4 Q96MT3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552240.1	PRICKLE1-004	3324	831aa	ENSP00000449819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8742	F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4 Q96MT3	NM_001144881.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345127.3	PRICKLE1-001	3315	831aa	ENSP00000345064.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8742	F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4 Q96MT3	NM_153026.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551050.1	PRICKLE1-007	693	119aa	ENSP00000446970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1J1 F8W1Q8 Q687H3 Q687H4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552108.1	PRICKLE1-006	585	159aa	ENSP00000447870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VUG8 F8W1J1 F8W1Q8 Q687H3 Q687H4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547113.1	PRICKLE1-002	456	109aa	ENSP00000446699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1Q8 Q687H3 Q687H4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552200.1	PRICKLE1-008	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 456 bps, Translation length: 109 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000547113.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404072 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000547113.1 PRICKLE1-002

Summary