Transcript: ENST00000486070.1 TAF8-008

Description

TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa [Source:HGNC Symbol;Acc:17300]

Gene Synonyms

43, FLJ32821, II, TAF, TAF(II)43, TAFII-43, TAFII43, TBN

Location

Chromosome 6: 42,018,269-42,019,518 forward strand.

About this transcript

This transcript has 2 exons, is associated with 760 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSG00000137413.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372977.3	TAF8-004	6680	310aa	ENSP00000362068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43462	Q7Z7C8	NM_138572.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494547.1	TAF8-005	2402	338aa	ENSP00000417867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372982.4	TAF8-001	1805	338aa	ENSP00000362073.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456846.2	TAF8-003	1293	311aa	ENSP00000411900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465926.1	TAF8-007	1222	234aa	ENSP00000418029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZU5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372978.3	TAF8-002	794	174aa	ENSP00000362069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472818.1	TAF8-009	719	123aa	ENSP00000417760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7M8 C9J856	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482432.1	TAF8-010	556	60aa	ENSP00000417738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J856	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482926.1	TAF8-011	1066	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486070.1	TAF8-008	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 480 bps,

Version

ENST00000486070.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357905 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000486070.1 TAF8-008

Summary