Transcript: ENST00000372977.3 TAF8-004

Description

TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa [Source:HGNC Symbol;Acc:17300]

Gene Synonyms

43, FLJ32821, II, TAF, TAF(II)43, TAFII-43, TAFII43, TBN

Location

Chromosome 6: 42,018,262-42,051,012 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 14360 variant alleles and maps to 552 oligo probes.

Gene

This transcript is a product of gene ENSG00000137413.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372977.3	TAF8-004	6680	310aa	ENSP00000362068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43462	Q7Z7C8	NM_138572.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494547.1	TAF8-005	2402	338aa	ENSP00000417867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372982.4	TAF8-001	1805	338aa	ENSP00000362073.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456846.2	TAF8-003	1293	311aa	ENSP00000411900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465926.1	TAF8-007	1222	234aa	ENSP00000418029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZU5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372978.3	TAF8-002	794	174aa	ENSP00000362069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472818.1	TAF8-009	719	123aa	ENSP00000417760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7M8 C9J856	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482432.1	TAF8-010	556	60aa	ENSP00000417738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J856	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482926.1	TAF8-011	1066	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486070.1	TAF8-008	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 6,680 bps, Translation length: 310 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z7C8

CCDS

This transcript is a member of the Human CCDS set: CCDS43462

Version

ENST00000372977.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000357901 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372977.3 TAF8-004

Summary