Transcript: ENST00000477432.1 YME1L1-002

Description

YME1-like 1 ATPase [Source:HGNC Symbol;Acc:12843]

Gene Synonyms

FTSH, FTSH1, MEG4, PAMP, YME1L

Location

Chromosome 10: 27,434,348-27,444,195 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 4796 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSG00000136758.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326799.3	YME1L1-005	3994	773aa	ENSP00000318480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7152	Q96TA2	NM_139312.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376016.3	YME1L1-004	3856	716aa	ENSP00000365184.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7151	Q96TA2	NM_014263.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477432.1	YME1L1-002	3474	136aa	ENSP00000473302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJ89	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375972.3	YME1L1-201	2469	683aa	ENSP00000365139.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58072	Q5T8D1 Q96TA2	NM_001253866.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396296.3	YME1L1-003	986	248aa	ENSP00000379590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8D2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491542.2	YME1L1-007	912	243aa	ENSP00000473557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427324.1	YME1L1-001	775	253aa	ENSP00000398713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8D1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463270.1	YME1L1-006	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,474 bps, Translation length: 136 residues

Version

ENST00000477432.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs74970402, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047303 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000477432.1 YME1L1-002

Summary