Transcript: ENST00000326799.3 YME1L1-005

Description

YME1-like 1 ATPase [Source:HGNC Symbol;Acc:12843]

Gene Synonyms

FTSH, FTSH1, MEG4, PAMP, YME1L

Location

Chromosome 10: 27,399,383-27,443,288 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 13 domains and features, is associated with 19242 variant alleles and maps to 844 oligo probes.

Gene

This transcript is a product of gene ENSG00000136758.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326799.3	YME1L1-005	3994	773aa	ENSP00000318480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7152	Q96TA2	NM_139312.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376016.3	YME1L1-004	3856	716aa	ENSP00000365184.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7151	Q96TA2	NM_014263.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477432.1	YME1L1-002	3474	136aa	ENSP00000473302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJ89	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375972.3	YME1L1-201	2469	683aa	ENSP00000365139.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58072	Q5T8D1 Q96TA2	NM_001253866.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396296.3	YME1L1-003	986	248aa	ENSP00000379590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8D2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491542.2	YME1L1-007	912	243aa	ENSP00000473557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427324.1	YME1L1-001	775	253aa	ENSP00000398713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8D1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463270.1	YME1L1-006	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,994 bps, Translation length: 773 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96TA2

CCDS

This transcript is a member of the Human CCDS set: CCDS7152

Version

ENST00000326799.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs74970402, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047306 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000326799.3 YME1L1-005

Summary