Transcript: ENST00000464025.1 LMO2-004

Description

LIM domain only 2 (rhombotin-like 1) [Source:HGNC Symbol;Acc:6642]

Gene Synonyms

RBTN2, RBTNL1, RHOM2, TTG2

Location

About this transcript

This transcript has 2 exons, is associated with 2817 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257818.2	LMO2-001	2294	227aa	ENSP00000257818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7888	P25791	NM_005574.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395833.3	LMO2-002	1687	158aa	ENSP00000379175.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44567	P25791	NM_001142316.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411482.1	LMO2-003	1519	55aa	ENSP00000401967.1	Nonsense mediated decay		P25791	-	-
ENST00000493667.1	LMO2-005	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464025.1	LMO2-004	1550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465614.1	LMO2-006	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,550 bps,

Version

ENST00000464025.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347779 (version 1)