Transcript: ENST00000526363.1 LRRIQ1-006

Description

leucine-rich repeats and IQ motif containing 1 [Source:HGNC Symbol;Acc:25708]

Gene Synonyms

FLJ12303, KIAA1801, RP11-193M21.1

Location

Chromosome 12: 85,554,409-85,626,815 forward strand.

About this transcript

This transcript has 3 exons, is associated with 33898 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSG00000133640.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393217.2	LRRIQ1-004	5394	1722aa	ENSP00000376910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41816	A8MY60 Q96JM4	NM_001079910.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526363.1	LRRIQ1-006	559	107aa	ENSP00000431756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000393212.3	LRRIQ1-007	555	164aa	ENSP00000376906.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MY60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533414.1	LRRIQ1-003	432	144aa	ENSP00000436898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000528777.3	LRRIQ1-005	786	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525971.2	LRRIQ1-001	4464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529408.1	LRRIQ1-002	1890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 559 bps, Translation length: 107 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000526363.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388254 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000526363.1 LRRIQ1-006

Summary