Transcript: ENST00000575919.1 SLC52A1-004

Description

solute carrier family 52 (riboflavin transporter), member 1 [Source:HGNC Symbol;Acc:30225]

Gene Synonyms

FLJ10060, GPCR42, GPR172B, PAR2, RBFVD, RFT1, RFVT1, hRFT1

Location

About this transcript

This transcript has 4 exons, is associated with 1592 variant alleles and maps to 325 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000512825.2	SLC52A1-002	2989	350aa	ENSP00000443026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5Y1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424747.1	SLC52A1-201	2412	448aa	ENSP00000399979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11066	Q9NWF4	NM_001104577.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000254853.5	SLC52A1-001	2377	448aa	ENSP00000254853.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11066	Q9NWF4	NM_017986.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573674.1	SLC52A1-003	2490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575919.1	SLC52A1-004	2385	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,385 bps,

Version

ENST00000575919.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438892 (version 1)