Transcript: ENST00000326181.6 TRAF7-001

Description

TNF receptor-associated factor 7, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:20456]

Gene Synonyms

DKFZp586I021, MGC7807, RFWD1, RNF119

Location

About this transcript

This transcript has 21 exons, is annotated with 44 domains and features, is associated with 15225 variant alleles and maps to 718 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326181.6	TRAF7-001	3700	670aa	ENSP00000318944.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10461	D3DU86 H3BR17 Q6Q0C0	NM_032271.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567645.1	TRAF7-005	737	147aa	ENSP00000456034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR17	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564067.1	TRAF7-006	874	54aa	ENSP00000457735.1	Nonsense mediated decay		H3BUP4	-	-
ENST00000565383.1	TRAF7-004	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567653.1	TRAF7-003	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569686.1	TRAF7-007	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570169.1	TRAF7-008	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,700 bps, Translation length: 670 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6Q0C0

CCDS

This transcript is a member of the Human CCDS set: CCDS10461

Version

ENST00000326181.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250762 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.