Transcript: ENST00000564067.1 TRAF7-006

Description

TNF receptor-associated factor 7, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:20456]

Gene Synonyms

DKFZp586I021, MGC7807, RFWD1, RNF119

Location

About this transcript

This transcript has 9 exons, is associated with 10615 variant alleles and maps to 191 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326181.6	TRAF7-001	3700	670aa	ENSP00000318944.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10461	D3DU86 H3BR17 Q6Q0C0	NM_032271.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567645.1	TRAF7-005	737	147aa	ENSP00000456034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR17	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564067.1	TRAF7-006	874	54aa	ENSP00000457735.1	Nonsense mediated decay		H3BUP4	-	-
ENST00000565383.1	TRAF7-004	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567653.1	TRAF7-003	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569686.1	TRAF7-007	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570169.1	TRAF7-008	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 874 bps, Translation length: 54 residues

Version

ENST00000564067.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434896 (version 1)