Transcript: ENST00000389532.4 CAMSAP1-001

Description

calmodulin regulated spectrin-associated protein 1 [Source:HGNC Symbol;Acc:19946]

Gene Synonyms

DKFZp434F195, FLJ31228, PRO2405, bA100C15.1

Location

Chromosome 9: 138,700,333-138,799,070 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 19 domains and features, is associated with 47849 variant alleles and maps to 993 oligo probes.

Gene

This transcript is a product of gene ENSG00000130559.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389532.4	CAMSAP1-001	7696	1602aa	ENSP00000374183.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35176	Q5T5Y3	NM_015447.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312405.6	CAMSAP1-010	6054	1324aa	ENSP00000312463.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5Y3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409386.3	CAMSAP1-002	5730	1613aa	ENSP00000386420.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5Y3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483991.1	CAMSAP1-008	4342	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492174.1	CAMSAP1-007	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493088.1	CAMSAP1-003	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460094.1	CAMSAP1-006	371	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468150.1	CAMSAP1-009	284	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482664.1	CAMSAP1-005	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487868.1	CAMSAP1-004	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 7,696 bps, Translation length: 1,602 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T5Y3

CCDS

This transcript is a member of the Human CCDS set: CCDS35176

Version

ENST00000389532.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055024 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389532.4 CAMSAP1-001

Summary