Transcript: ENST00000487868.1 CAMSAP1-004

Description

calmodulin regulated spectrin-associated protein 1 [Source:HGNC Symbol;Acc:19946]

Gene Synonyms

DKFZp434F195, FLJ31228, PRO2405, bA100C15.1

Location

Chromosome 9: 138,703,361-138,710,017 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3274 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSG00000130559.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389532.4	CAMSAP1-001	7696	1602aa	ENSP00000374183.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35176	Q5T5Y3	NM_015447.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000312405.6	CAMSAP1-010	6054	1324aa	ENSP00000312463.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5Y3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409386.3	CAMSAP1-002	5730	1613aa	ENSP00000386420.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5Y3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000483991.1	CAMSAP1-008	4342	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492174.1	CAMSAP1-007	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493088.1	CAMSAP1-003	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460094.1	CAMSAP1-006	371	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468150.1	CAMSAP1-009	284	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482664.1	CAMSAP1-005	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487868.1	CAMSAP1-004	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 411 bps,

Version

ENST00000487868.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055027 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000487868.1 CAMSAP1-004

Summary