Transcript: ENST00000509707.1 SPINK2-004

Description

serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) [Source:HGNC Symbol;Acc:11245]

Gene Synonyms

HUSI-II

Location

About this transcript

This transcript has 2 exons, is associated with 808 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248701.4	SPINK2-001	613	84aa	ENSP00000248701.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3508	P20155	NM_021114.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506738.1	SPINK2-002	763	134aa	ENSP00000425961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63971	D6RI10	NM_001271720.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504762.1	SPINK2-003	659	119aa	ENSP00000423858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63972	D6RC51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509707.1	SPINK2-004	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 437 bps,

Version

ENST00000509707.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362244 (version 1)