Transcript: ENST00000248701.4 SPINK2-001

Description

serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) [Source:HGNC Symbol;Acc:11245]

Gene Synonyms

HUSI-II

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 5485 variant alleles and maps to 300 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248701.4	SPINK2-001	613	84aa	ENSP00000248701.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3508	P20155	NM_021114.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506738.1	SPINK2-002	763	134aa	ENSP00000425961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63971	D6RI10	NM_001271720.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504762.1	SPINK2-003	659	119aa	ENSP00000423858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63972	D6RC51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509707.1	SPINK2-004	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 613 bps, Translation length: 84 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20155

CCDS

This transcript is a member of the Human CCDS set: CCDS3508

Version

ENST00000248701.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250690 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.