Transcript: ENST00000498194.1 PCK1-004

Description

phosphoenolpyruvate carboxykinase 1 (soluble) [Source:HGNC Symbol;Acc:8724]

Gene Synonyms

PEPCK-C, PEPCK1, PEPCKC

Location

Chromosome 20: 56,137,404-56,138,663 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1010 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSG00000124253.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319441.4	PCK1-001	2686	622aa	ENSP00000319814.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13460	P35558	NM_002591.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543666.1	PCK1-202	1439	305aa	ENSP00000445767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535860.1	PCK1-201	1358	313aa	ENSP00000444342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZM4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467047.1	PCK1-002	5074	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475833.1	PCK1-003	1037	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498194.1	PCK1-004	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485958.1	PCK1-006	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470051.1	PCK1-005	409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 783 bps,

Version

ENST00000498194.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000267808 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000498194.1 PCK1-004

Summary