Transcript: ENST00000319441.4 PCK1-001

Description

phosphoenolpyruvate carboxykinase 1 (soluble) [Source:HGNC Symbol;Acc:8724]

Gene Synonyms

PEPCK-C, PEPCK1, PEPCKC

Location

Chromosome 20: 56,136,136-56,141,513 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 3907 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000124253.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319441.4	PCK1-001	2686	622aa	ENSP00000319814.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13460	P35558	NM_002591.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543666.1	PCK1-202	1439	305aa	ENSP00000445767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535860.1	PCK1-201	1358	313aa	ENSP00000444342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZM4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467047.1	PCK1-002	5074	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475833.1	PCK1-003	1037	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498194.1	PCK1-004	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485958.1	PCK1-006	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470051.1	PCK1-005	409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,686 bps, Translation length: 622 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35558

CCDS

This transcript is a member of the Human CCDS set: CCDS13460

Version

ENST00000319441.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079851 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000319441.4 PCK1-001

Summary