Transcript: ENST00000454289.3 TSFM-001

Description

Ts translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:12367]

Gene Synonyms

EF-TS, EF-Tsmt, EFTS, EFTSMT

Location

Chromosome 12: 58,176,372-58,191,367 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 7387 variant alleles and maps to 598 oligo probes.

Gene

This transcript is a product of gene ENSG00000123297.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454289.3	TSFM-001	2192	325aa	ENSP00000388330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8958	C9JG32 C9JT21 E5KS95 P43897	NM_005726.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540550.1	TSFM-202	1951	167aa	ENSP00000440987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53811	P43897	NM_001172695.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350762.5	TSFM-201	1450	285aa	ENSP00000242983.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323833.8	TSFM-002	1218	346aa	ENSP00000313877.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53809	P43897	NM_001172696.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543727.1	TSFM-203	930	215aa	ENSP00000439342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53810	C9JG32 P43897	NM_001172697.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550559.1	TSFM-008	897	230aa	ENSP00000448575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG32 F8VS27	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548851.1	TSFM-009	794	200aa	ENSP00000450041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG32 F8VPA7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457189.1	TSFM-006	689	168aa	ENSP00000389162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG32 C9JT21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434359.1	TSFM-005	589	140aa	ENSP00000390679.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG32	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417094.1	TSFM-003	558	89aa	ENSP00000406339.1	Nonsense mediated decay		F8WCK2	-	-
ENST00000497617.1	TSFM-007	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,192 bps, Translation length: 325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43897

CCDS

This transcript is a member of the Human CCDS set: CCDS8958

Version

ENST00000454289.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000329192 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000454289.3 TSFM-001

Summary