Transcript: ENST00000439264.1 SFTPA1-009

Description

surfactant protein A1 [Source:HGNC Symbol;Acc:10798]

Gene Synonyms

COLEC4, COLEC5, PSAP, PSP-A, PSPA, SFTP1, SFTPA, SFTPA1B, SFTPA2B, SP-A, SP-A1, SPA, SPA1, SPA2, SPAII

Location

Chromosome 10: 81,370,711-81,373,596 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 1650 variant alleles and maps to 635 oligo probes.

Gene

This transcript is a product of gene ENSG00000122852.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398636.3	SFTPA1-203	2212	248aa	ENSP00000381633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44445	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	NM_005411.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428376.2	SFTPA1-204	2141	248aa	ENSP00000411102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44445	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	NM_001164647.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372313.5	SFTPA1-202	1015	189aa	ENSP00000361387.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNW5 B7Z4Y4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419470.2	SFTPA1-008	953	263aa	ENSP00000397082.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44444	B4DNR9 B4DNW5 B7Z4Y4 J3KPA7 Q8IWL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372308.3	SFTPA1-201	865	245aa	ENSP00000361382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPA7	NM_001093770.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439264.1	SFTPA1-009	596	158aa	ENSP00000401649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429958.1	SFTPA1-007	527	158aa	ENSP00000395527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486922.1	SFTPA1-011	342	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 596 bps, Translation length: 158 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IWL2

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000439264.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048957 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000439264.1 SFTPA1-009

Summary