Transcript: ENST00000466550.1 RPL21-006

Description

ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Gene Synonyms

ACA27, DKFZp686C06101, FLJ27458, L21, MGC104274, MGC104275, MGC71252, RNU102, Z18

Location

Chromosome 13: 27,827,902-27,829,993 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1201 variant alleles and maps to 975 oligo probes.

Gene

This transcript is a product of gene ENSG00000122026.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311549.6	RPL21-001	815	160aa	ENSP00000346027.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	NM_000982.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319826.4	RPL21-004	806	160aa	ENSP00000370574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326092.4	RPL21-005	641	160aa	ENSP00000370569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272274.4	RPL21-003	616	160aa	ENSP00000351021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493317.1	RPL21-009	438	122aa	ENSP00000471695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R181	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461690.1	RPL21-007	681	87aa	ENSP00000434298.1	Nonsense mediated decay		G3V1B3	-	-
ENST00000483765.1	RPL21-008	453	59aa	ENSP00000473246.1	Nonsense mediated decay		M0R3I5	-	-
ENST00000466550.1	RPL21-006	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485756.1	RPL21-010	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473558.1	RPL21-002	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 756 bps,

Version

ENST00000466550.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044275 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000466550.1 RPL21-006

Summary