Transcript: ENST00000311549.6 RPL21-001

Description

ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Gene Synonyms

ACA27, DKFZp686C06101, FLJ27458, L21, MGC104274, MGC104275, MGC71252, RNU102, Z18

Location

Chromosome 13: 27,825,446-27,830,705 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 3135 variant alleles and maps to 1048 oligo probes.

Gene

This transcript is a product of gene ENSG00000122026.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311549.6	RPL21-001	815	160aa	ENSP00000346027.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	NM_000982.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319826.4	RPL21-004	806	160aa	ENSP00000370574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326092.4	RPL21-005	641	160aa	ENSP00000370569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272274.4	RPL21-003	616	160aa	ENSP00000351021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9320	M0R181 P46778 Q6IAX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493317.1	RPL21-009	438	122aa	ENSP00000471695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R181	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461690.1	RPL21-007	681	87aa	ENSP00000434298.1	Nonsense mediated decay		G3V1B3	-	-
ENST00000483765.1	RPL21-008	453	59aa	ENSP00000473246.1	Nonsense mediated decay		M0R3I5	-	-
ENST00000466550.1	RPL21-006	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485756.1	RPL21-010	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473558.1	RPL21-002	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 815 bps, Translation length: 160 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46778

CCDS

This transcript is a member of the Human CCDS set: CCDS9320

Version

ENST00000311549.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044270 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000311549.6 RPL21-001

Summary