Transcript: ENST00000476968.1 TMEM39B-008

Description

transmembrane protein 39B [Source:HGNC Symbol;Acc:25510]

Gene Synonyms

FLJ10315

Location

Chromosome 1: 32,538,767-32,568,467 forward strand.

About this transcript

This transcript has 11 exons, is associated with 14291 variant alleles and maps to 452 oligo probes.

Gene

This transcript is a product of gene ENSG00000121775.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000427288.1	TMEM39B-202	2012	342aa	ENSP00000391719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DTN8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336294.5	TMEM39B-001	1813	492aa	ENSP00000338165.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS351	B4DQE6 Q9BT39 Q9GZU3 Q9NW51	NM_018056.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373634.4	TMEM39B-201	1490	293aa	ENSP00000362737.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQE6 Q9BT39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456834.2	TMEM39B-203	1156	221aa	ENSP00000390057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKN8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438825.1	TMEM39B-009	690	192aa	ENSP00000414616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVU5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441402.1	TMEM39B-003	1538	193aa	ENSP00000390889.1	Nonsense mediated decay		F8WB89	-	-
ENST00000487305.1	TMEM39B-002	2087	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476968.1	TMEM39B-008	1994	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468135.1	TMEM39B-004	1834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472503.1	TMEM39B-006	950	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498613.1	TMEM39B-007	854	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466321.1	TMEM39B-005	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 1,994 bps,

Version

ENST00000476968.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091380 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000476968.1 TMEM39B-008

Summary