Transcript: ENST00000558139.1 LHX4-003

Description

LIM homeobox 4 [Source:HGNC Symbol;Acc:21734]

Gene Synonyms

CPHD4, Gsh4

Location

About this transcript

This transcript has 2 exons, is associated with 8162 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263726.2	LHX4-001	7083	390aa	ENSP00000263726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1338	Q5RLJ1 Q5RLJ2 Q5RLJ3 Q969G2 Q96JP7	NM_033343.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561113.1	LHX4-002	603	151aa	ENSP00000452783.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558139.1	LHX4-003	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 721 bps,

Version

ENST00000558139.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415694 (version 1)