Transcript: ENST00000263726.2 LHX4-001

Description

LIM homeobox 4 [Source:HGNC Symbol;Acc:21734]

Gene Synonyms

CPHD4, Gsh4

Location

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 22653 variant alleles and maps to 402 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263726.2	LHX4-001	7083	390aa	ENSP00000263726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1338	Q5RLJ1 Q5RLJ2 Q5RLJ3 Q969G2 Q96JP7	NM_033343.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561113.1	LHX4-002	603	151aa	ENSP00000452783.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558139.1	LHX4-003	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 7,083 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q969G2

CCDS

This transcript is a member of the Human CCDS set: CCDS1338

Version

ENST00000263726.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084995 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.