Transcript: ENST00000560707.1 TSHZ3-003

Description

teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:30700]

Gene Synonyms

KIAA1474, TSH3, ZNF537

Location

About this transcript

This transcript has 2 exons, is associated with 12147 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240587.4	TSHZ3-001	5176	1081aa	ENSP00000240587.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12421	A1L0U7 Q63HK5	NM_020856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558569.1	TSHZ3-002	441	33aa	ENSP00000475613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ78	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560707.1	TSHZ3-003	835	35aa	ENSP00000475888.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 835 bps, Translation length: 35 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000560707.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419025 (version 2)