Transcript: ENST00000240587.4 TSHZ3-001

Description

teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:30700]

Gene Synonyms

KIAA1474, TSH3, ZNF537

Location

About this transcript

This transcript has 2 exons, is annotated with 30 domains and features, is associated with 34791 variant alleles and maps to 322 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240587.4	TSHZ3-001	5176	1081aa	ENSP00000240587.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12421	A1L0U7 Q63HK5	NM_020856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558569.1	TSHZ3-002	441	33aa	ENSP00000475613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ78	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560707.1	TSHZ3-003	835	35aa	ENSP00000475888.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 5,176 bps, Translation length: 1,081 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q63HK5

CCDS

This transcript is a member of the Human CCDS set: CCDS12421

Version

ENST00000240587.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000316743 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.