Transcript: ENST00000481013.1 EXOSC8-001

Description

exosome component 8 [Source:HGNC Symbol;Acc:17035]

Gene Synonyms

CIP3, EAP2, OIP2, RP11-421P11.3, RRP43, Rrp43p, bA421P11.3, p9

Location

Chromosome 13: 37,581,115-37,583,750 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 1180 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000120699.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389704.3	EXOSC8-003	1198	276aa	ENSP00000374354.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31958	Q96B26	NM_181503.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481013.1	EXOSC8-001	524	69aa	ENSP00000419203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C581	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000239893.5	EXOSC8-008	694	37aa	ENSP00000239893.5	Nonsense mediated decay		H7C5Z2	-	-
ENST00000489088.1	EXOSC8-004	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474661.1	EXOSC8-005	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488779.1	EXOSC8-011	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464235.1	EXOSC8-012	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488108.1	EXOSC8-010	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470423.1	EXOSC8-006	208	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490537.2	EXOSC8-002	2423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495092.1	EXOSC8-009	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 524 bps, Translation length: 69 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000481013.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044533 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000481013.1 EXOSC8-001

Summary