Transcript: ENST00000389704.3 EXOSC8-003

Description

exosome component 8 [Source:HGNC Symbol;Acc:17035]

Gene Synonyms

CIP3, EAP2, OIP2, RP11-421P11.3, RRP43, Rrp43p, bA421P11.3, p9

Location

Chromosome 13: 37,574,678-37,583,538 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 4081 variant alleles and maps to 444 oligo probes.

Gene

This transcript is a product of gene ENSG00000120699.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389704.3	EXOSC8-003	1198	276aa	ENSP00000374354.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31958	Q96B26	NM_181503.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481013.1	EXOSC8-001	524	69aa	ENSP00000419203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C581	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000239893.5	EXOSC8-008	694	37aa	ENSP00000239893.5	Nonsense mediated decay		H7C5Z2	-	-
ENST00000489088.1	EXOSC8-004	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474661.1	EXOSC8-005	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488779.1	EXOSC8-011	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464235.1	EXOSC8-012	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488108.1	EXOSC8-010	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470423.1	EXOSC8-006	208	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490537.2	EXOSC8-002	2423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495092.1	EXOSC8-009	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,198 bps, Translation length: 276 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96B26

CCDS

This transcript is a member of the Human CCDS set: CCDS31958

Version

ENST00000389704.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044535 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389704.3 EXOSC8-003

Summary