Transcript: ENST00000557106.1 NRDE2-005

Description

NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:20186]

Gene Synonyms

C14orf102, FLJ14051

Location

Chromosome 14: 90,782,931-90,798,313 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 6570 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000119720.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354366.3	NRDE2-001	5828	1164aa	ENSP00000346335.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9890	E9PBK4 Q658X2 Q9H7Z3	NM_017970.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357904.3	NRDE2-201	3465	933aa	ENSP00000350579.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBK4 Q658X2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554464.1	NRDE2-007	612	204aa	ENSP00000452071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJT0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553409.1	NRDE2-002	3434	43aa	ENSP00000451025.1	Nonsense mediated decay		G3V338	-	-
ENST00000556189.1	NRDE2-003	2937	227aa	ENSP00000452107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557106.1	NRDE2-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557064.1	NRDE2-006	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555903.1	NRDE2-004	1384	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557732.1	NRDE2-008	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 580 bps,

Version

ENST00000557106.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411270 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000557106.1 NRDE2-005

Summary