Transcript: ENST00000354366.3 NRDE2-001

Description

NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:20186]

Gene Synonyms

C14orf102, FLJ14051

Location

Chromosome 14: 90,742,580-90,798,481 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features, is associated with 24324 variant alleles and maps to 656 oligo probes.

Gene

This transcript is a product of gene ENSG00000119720.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354366.3	NRDE2-001	5828	1164aa	ENSP00000346335.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9890	E9PBK4 Q658X2 Q9H7Z3	NM_017970.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357904.3	NRDE2-201	3465	933aa	ENSP00000350579.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBK4 Q658X2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554464.1	NRDE2-007	612	204aa	ENSP00000452071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJT0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553409.1	NRDE2-002	3434	43aa	ENSP00000451025.1	Nonsense mediated decay		G3V338	-	-
ENST00000556189.1	NRDE2-003	2937	227aa	ENSP00000452107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557106.1	NRDE2-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557064.1	NRDE2-006	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555903.1	NRDE2-004	1384	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557732.1	NRDE2-008	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 5,828 bps, Translation length: 1,164 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H7Z3

CCDS

This transcript is a member of the Human CCDS set: CCDS9890

Version

ENST00000354366.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411264 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000354366.3 NRDE2-001

Summary