Transcript: ENST00000489403.1 CPSF3-005

Description

cleavage and polyadenylation specific factor 3, 73kDa [Source:HGNC Symbol;Acc:2326]

Gene Synonyms

CPSF-73, CPSF73, YSH1

Location

About this transcript

This transcript has 5 exons, is associated with 7444 variant alleles and maps to 220 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000460593.1	CPSF3-002	3157	647aa	ENSP00000418957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZH6 G5E9W3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238112.3	CPSF3-001	2345	684aa	ENSP00000238112.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1664	C9JZH6 G5E9W3 Q9UKF6	NM_016207.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475482.1	CPSF3-003	871	136aa	ENSP00000419744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489403.1	CPSF3-005	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489629.1	CPSF3-004	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 688 bps,

Version

ENST00000489403.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353333 (version 1)