Transcript: ENST00000533951.1 PRG4-005

Description

proteoglycan 4 [Source:HGNC Symbol;Acc:9364]

Gene Synonyms

CACP, FLJ32635, HAPO, JCAP, MSF, SZP, bG174L6.2

Location

Chromosome 1: 186,265,411-186,275,610 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 4458 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSG00000116690.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445192.2	PRG4-001	5044	1404aa	ENSP00000399679.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1369	B3KQ20 Q92954	NM_005807.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367483.4	PRG4-002	4921	1363aa	ENSP00000356453.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44288	B3KQ20 Q92954	NM_001127708.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367486.3	PRG4-202	4913	1361aa	ENSP00000356456.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQ20 Q92954	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367485.4	PRG4-003	4765	1311aa	ENSP00000356455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44287	B3KQ20 Q92954	NM_001127710.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367484.3	PRG4-201	3629	933aa	ENSP00000356454.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQ20 E7EQ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367482.4	PRG4-004	2606	853aa	ENSP00000356452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533951.1	PRG4-005	531	162aa	ENSP00000431330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLR3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 531 bps, Translation length: 162 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000533951.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382431 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000533951.1 PRG4-005

Summary