Transcript: ENST00000445192.2 PRG4-001

Description

proteoglycan 4 [Source:HGNC Symbol;Acc:9364]

Gene Synonyms

CACP, FLJ32635, HAPO, JCAP, MSF, SZP, bG174L6.2

Location

Chromosome 1: 186,265,411-186,283,694 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 39 domains and features, is associated with 9761 variant alleles and maps to 585 oligo probes.

Gene

This transcript is a product of gene ENSG00000116690.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445192.2	PRG4-001	5044	1404aa	ENSP00000399679.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1369	B3KQ20 Q92954	NM_005807.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367483.4	PRG4-002	4921	1363aa	ENSP00000356453.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44288	B3KQ20 Q92954	NM_001127708.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367486.3	PRG4-202	4913	1361aa	ENSP00000356456.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQ20 Q92954	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367485.4	PRG4-003	4765	1311aa	ENSP00000356455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44287	B3KQ20 Q92954	NM_001127710.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367484.3	PRG4-201	3629	933aa	ENSP00000356454.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQ20 E7EQ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367482.4	PRG4-004	2606	853aa	ENSP00000356452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533951.1	PRG4-005	531	162aa	ENSP00000431330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLR3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,044 bps, Translation length: 1,404 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92954

CCDS

This transcript is a member of the Human CCDS set: CCDS1369

Version

ENST00000445192.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000086346 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000445192.2 PRG4-001

Summary