Transcript: ENST00000480594.1 SLC1A4-002

Description

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:HGNC Symbol;Acc:10942]

Gene Synonyms

ASCT1, SATT

Location

About this transcript

This transcript has 7 exons, is associated with 10163 variant alleles and maps to 683 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234256.3	SLC1A4-001	4561	532aa	ENSP00000234256.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1879	P43007	NM_003038.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531327.1	SLC1A4-005	1217	234aa	ENSP00000431942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54362	P43007	NM_001193493.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493121.1	SLC1A4-003	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471551.1	SLC1A4-004	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480594.1	SLC1A4-002	5789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 5,789 bps,

Version

ENST00000480594.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327463 (version 1)