Transcript: ENST00000234256.3 SLC1A4-001

Description

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:HGNC Symbol;Acc:10942]

Gene Synonyms

ASCT1, SATT

Location

About this transcript

This transcript has 8 exons, is annotated with 34 domains and features, is associated with 14326 variant alleles and maps to 734 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234256.3	SLC1A4-001	4561	532aa	ENSP00000234256.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1879	P43007	NM_003038.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531327.1	SLC1A4-005	1217	234aa	ENSP00000431942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54362	P43007	NM_001193493.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493121.1	SLC1A4-003	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471551.1	SLC1A4-004	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480594.1	SLC1A4-002	5789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,561 bps, Translation length: 532 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43007

CCDS

This transcript is a member of the Human CCDS set: CCDS1879

Version

ENST00000234256.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251726 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.