Transcript: ENST00000427077.1 IL1RL1-003

Description

interleukin 1 receptor-like 1 [Source:HGNC Symbol;Acc:5998]

Gene Synonyms

DER4, FIT-1, IL33R, ST2, ST2L, ST2V, T1

Location

Chromosome 2: 102,953,748-102,960,216 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 3424 variant alleles and maps to 532 oligo probes.

Gene

This transcript is a product of gene ENSG00000115602.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311734.2	IL1RL1-002	3994	328aa	ENSP00000310371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2058	A8VPW9 B4E0I3 C9JSY6 Q01638	NM_001282408.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409584.1	IL1RL1-008	2693	314aa	ENSP00000386618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8VPW9 C9JSY6 E9PC41	NM_003856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233954.1	IL1RL1-001	2058	556aa	ENSP00000233954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2057	A8VPX0 C9JSY6 Q01638	NM_016232.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393393.3	IL1RL1-201	1051	259aa	ENSP00000377052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSY6 Q01638	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404917.2	IL1RL1-202	898	211aa	ENSP00000384822.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8VPW9 B4E0I3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447231.1	IL1RL1-004	545	38aa	ENSP00000409437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSY6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427077.1	IL1RL1-003	1680	259aa	ENSP00000391120.1	Nonsense mediated decay		C9JSY6 Q01638	-	-
ENST00000473175.1	IL1RL1-007	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482701.1	IL1RL1-005	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463990.1	IL1RL1-006	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 1,680 bps, Translation length: 259 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01638

Version

ENST00000427077.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000253298 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000427077.1 IL1RL1-003

Summary