Transcript: ENST00000233954.1 IL1RL1-001

Description

interleukin 1 receptor-like 1 [Source:HGNC Symbol;Acc:5998]

Gene Synonyms

DER4, FIT-1, IL33R, ST2, ST2L, ST2V, T1

Location

Chromosome 2: 102,927,962-102,968,497 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 39 domains and features, is associated with 20389 variant alleles and maps to 561 oligo probes.

Gene

This transcript is a product of gene ENSG00000115602.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311734.2	IL1RL1-002	3994	328aa	ENSP00000310371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2058	A8VPW9 B4E0I3 C9JSY6 Q01638	NM_001282408.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409584.1	IL1RL1-008	2693	314aa	ENSP00000386618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8VPW9 C9JSY6 E9PC41	NM_003856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233954.1	IL1RL1-001	2058	556aa	ENSP00000233954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2057	A8VPX0 C9JSY6 Q01638	NM_016232.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393393.3	IL1RL1-201	1051	259aa	ENSP00000377052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSY6 Q01638	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404917.2	IL1RL1-202	898	211aa	ENSP00000384822.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8VPW9 B4E0I3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447231.1	IL1RL1-004	545	38aa	ENSP00000409437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSY6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427077.1	IL1RL1-003	1680	259aa	ENSP00000391120.1	Nonsense mediated decay		C9JSY6 Q01638	-	-
ENST00000473175.1	IL1RL1-007	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482701.1	IL1RL1-005	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463990.1	IL1RL1-006	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,058 bps, Translation length: 556 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01638

CCDS

This transcript is a member of the Human CCDS set: CCDS2057

Version

ENST00000233954.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253296 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000233954.1 IL1RL1-001

Summary