Transcript: ENST00000478157.1 IFT57-002

Description

intraflagellar transport 57 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:17367]

Gene Synonyms

DERP8, ESRRBL1, FLJ10147, HIPPI, MHS4R2

Location

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 22481 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264538.3	IFT57-001	3203	429aa	ENSP00000264538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2951	Q9NWB7	NM_018010.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492106.1	IFT57-003	526	157aa	ENSP00000417439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478157.1	IFT57-002	931	81aa	ENSP00000417768.1	Nonsense mediated decay		F8WBM2	-	-
ENST00000468021.1	IFT57-005	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465024.1	IFT57-004	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485979.1	IFT57-006	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 931 bps, Translation length: 81 residues

Version

ENST00000478157.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353919 (version 1)