Transcript: ENST00000264538.3 IFT57-001

Description

intraflagellar transport 57 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:17367]

Gene Synonyms

DERP8, ESRRBL1, FLJ10147, HIPPI, MHS4R2

Location

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 24877 variant alleles and maps to 580 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264538.3	IFT57-001	3203	429aa	ENSP00000264538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2951	Q9NWB7	NM_018010.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492106.1	IFT57-003	526	157aa	ENSP00000417439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478157.1	IFT57-002	931	81aa	ENSP00000417768.1	Nonsense mediated decay		F8WBM2	-	-
ENST00000468021.1	IFT57-005	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465024.1	IFT57-004	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485979.1	IFT57-006	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,203 bps, Translation length: 429 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NWB7

CCDS

This transcript is a member of the Human CCDS set: CCDS2951

Version

ENST00000264538.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353918 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.