Transcript: ENST00000231524.9 TRIM23-001

Description

tripartite motif containing 23 [Source:HGNC Symbol;Acc:660]

Gene Synonyms

ARD1, ARFD1, RNF46

Location

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features, is associated with 14263 variant alleles and maps to 756 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231524.9	TRIM23-001	4186	574aa	ENSP00000231524.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3987	D6R9E9 P36406	NM_001656.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381018.3	TRIM23-003	1855	569aa	ENSP00000370406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43322	D6R9E9 P36406	NM_033227.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274327.7	TRIM23-002	1829	546aa	ENSP00000274327.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3986	D6R9E9 P36406	NM_033228.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513794.1	TRIM23-004	574	35aa	ENSP00000422144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9E9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505205.1	TRIM23-005	793	126aa	ENSP00000424044.1	Nonsense mediated decay		D6R9E9 D6RBN4	-	-
ENST00000506400.1	TRIM23-006	556	34aa	ENSP00000427103.1	Nonsense mediated decay		D6RD22	-	-
ENST00000508808.1	TRIM23-007	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,186 bps, Translation length: 574 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36406

CCDS

This transcript is a member of the Human CCDS set: CCDS3987

Version

ENST00000231524.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000215058 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.