Transcript: ENST00000506400.1 TRIM23-006

Description

tripartite motif containing 23 [Source:HGNC Symbol;Acc:660]

Gene Synonyms

ARD1, ARFD1, RNF46

Location

About this transcript

This transcript has 4 exons, is associated with 5592 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231524.9	TRIM23-001	4186	574aa	ENSP00000231524.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3987	D6R9E9 P36406	NM_001656.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381018.3	TRIM23-003	1855	569aa	ENSP00000370406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43322	D6R9E9 P36406	NM_033227.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274327.7	TRIM23-002	1829	546aa	ENSP00000274327.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3986	D6R9E9 P36406	NM_033228.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513794.1	TRIM23-004	574	35aa	ENSP00000422144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9E9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505205.1	TRIM23-005	793	126aa	ENSP00000424044.1	Nonsense mediated decay		D6R9E9 D6RBN4	-	-
ENST00000506400.1	TRIM23-006	556	34aa	ENSP00000427103.1	Nonsense mediated decay		D6RD22	-	-
ENST00000508808.1	TRIM23-007	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 556 bps, Translation length: 34 residues

Version

ENST00000506400.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370128 (version 2)