Transcript: ENST00000419524.2 FGF1-010

Description

fibroblast growth factor 1 (acidic) [Source:HGNC Symbol;Acc:3665]

Gene Synonyms

AFGF, ECGF, ECGF-beta, ECGFA, ECGFB, FGF-1, FGF-alpha, FGFA, GLIO703, HBGF-1, HBGF1

Location

Chromosome 5: 141,974,808-142,077,611 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 43004 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000113578.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359370.6	FGF1-001	3660	155aa	ENSP00000352329.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	NM_033137.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378046.1	FGF1-008	2582	155aa	ENSP00000367285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	NM_001257211.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337706.2	FGF1-002	1469	155aa	ENSP00000338548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441680.2	FGF1-006	777	155aa	ENSP00000404742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	-
ENST00000407758.1	FGF1-009	759	93aa	ENSP00000383969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCF4 C9JUP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360966.5	FGF1-007	695	60aa	ENSP00000354231.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4276	C9JUP6 P05230	NM_033136.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419524.2	FGF1-010	683	155aa	ENSP00000396195.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411960.1	FGF1-013	550	41aa	ENSP00000399458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000394496.2	FGF1-004	298	58aa	ENSP00000378005.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDC5 C9JUP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494579.1	FGF1-011	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494344.1	FGF1-012	992	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489937.1	FGF1-003	958	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 683 bps, Translation length: 155 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05230

CCDS

This transcript is a member of the Human CCDS set: CCDS4275

Version

ENST00000419524.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268557 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000419524.2 FGF1-010

Summary