Transcript: ENST00000394496.2 FGF1-004

Description

fibroblast growth factor 1 (acidic) [Source:HGNC Symbol;Acc:3665]

Gene Synonyms

AFGF, ECGF, ECGF-beta, ECGFA, ECGFB, FGF-1, FGF-alpha, FGFA, GLIO703, HBGF-1, HBGF1

Location

Chromosome 5: 141,980,365-142,023,766 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 18232 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000113578.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359370.6	FGF1-001	3660	155aa	ENSP00000352329.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	NM_033137.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378046.1	FGF1-008	2582	155aa	ENSP00000367285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	NM_001257211.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337706.2	FGF1-002	1469	155aa	ENSP00000338548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441680.2	FGF1-006	777	155aa	ENSP00000404742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	-
ENST00000407758.1	FGF1-009	759	93aa	ENSP00000383969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCF4 C9JUP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360966.5	FGF1-007	695	60aa	ENSP00000354231.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4276	C9JUP6 P05230	NM_033136.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419524.2	FGF1-010	683	155aa	ENSP00000396195.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4275	A8K147 C9JDC5 C9JUP6 P05230 Q6LBM3 Q9UBK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411960.1	FGF1-013	550	41aa	ENSP00000399458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000394496.2	FGF1-004	298	58aa	ENSP00000378005.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDC5 C9JUP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494579.1	FGF1-011	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494344.1	FGF1-012	992	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489937.1	FGF1-003	958	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 298 bps, Translation length: 58 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000394496.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000132738 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000394496.2 FGF1-004

Summary