Transcript: ENST00000477998.1 SMOC2-003

Description

SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:20323]

Gene Synonyms

DTDP1, MST117, MSTP117, MSTP140, SMAP2, bA270C4A.1, bA37D8.1, dJ421D16.1

Location

About this transcript

This transcript has 4 exons, is associated with 10247 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354536.5	SMOC2-002	3150	457aa	ENSP00000346537.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5307	B4DNB1 Q9H3U7	NM_022138.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356284.2	SMOC2-001	3117	446aa	ENSP00000348630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55076	B4DNB1 Q9H3U7	NM_001166412.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417208.1	SMOC2-005	672	84aa	ENSP00000398696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y5I1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392100.2	SMOC2-004	400	67aa	ENSP00000375949.2	Nonsense mediated decay		H0Y3J4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477998.1	SMOC2-003	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 362 bps,

Version

ENST00000477998.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000043203 (version 3)