Transcript: ENST00000356284.2 SMOC2-001

Description

SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:20323]

Gene Synonyms

DTDP1, MST117, MSTP117, MSTP140, SMAP2, bA270C4A.1, bA37D8.1, dJ421D16.1

Location

About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 110250 variant alleles and maps to 494 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354536.5	SMOC2-002	3150	457aa	ENSP00000346537.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5307	B4DNB1 Q9H3U7	NM_022138.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356284.2	SMOC2-001	3117	446aa	ENSP00000348630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55076	B4DNB1 Q9H3U7	NM_001166412.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417208.1	SMOC2-005	672	84aa	ENSP00000398696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y5I1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392100.2	SMOC2-004	400	67aa	ENSP00000375949.2	Nonsense mediated decay		H0Y3J4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477998.1	SMOC2-003	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,117 bps, Translation length: 446 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H3U7

CCDS

This transcript is a member of the Human CCDS set: CCDS55076

Version

ENST00000356284.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000043201 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.