Transcript: ENST00000490799.1 SLC26A8-001

Description

solute carrier family 26 (anion exchanger), member 8 [Source:HGNC Symbol;Acc:14468]

Gene Synonyms

SPGF3, TAT1

Location

Chromosome 6: 35,911,291-35,992,632 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 25 domains and features, is associated with 32844 variant alleles and maps to 629 oligo probes.

Gene

This transcript is a product of gene ENSG00000112053.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000490799.1	SLC26A8-001	3653	970aa	ENSP00000417638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_052961.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355574.2	SLC26A8-005	3463	970aa	ENSP00000347778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_001193476.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394602.2	SLC26A8-006	3144	865aa	ENSP00000378100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4814	Q96RN1	NM_138718.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480663.1	SLC26A8-007	582	190aa	ENSP00000420488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465492.1	SLC26A8-002	2104	320aa	ENSP00000418107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469847.1	SLC26A8-008	740	184aa	ENSP00000419700.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486155.1	SLC26A8-004	2989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466805.1	SLC26A8-003	2876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,653 bps, Translation length: 970 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RN1

CCDS

This transcript is a member of the Human CCDS set: CCDS4813

Version

ENST00000490799.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040325 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000490799.1 SLC26A8-001

Summary