Transcript: ENST00000466805.1 SLC26A8-003

Description

solute carrier family 26 (anion exchanger), member 8 [Source:HGNC Symbol;Acc:14468]

Gene Synonyms

SPGF3, TAT1

Location

Chromosome 6: 35,911,295-35,937,599 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 10764 variant alleles and maps to 317 oligo probes.

Gene

This transcript is a product of gene ENSG00000112053.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000490799.1	SLC26A8-001	3653	970aa	ENSP00000417638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_052961.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355574.2	SLC26A8-005	3463	970aa	ENSP00000347778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_001193476.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394602.2	SLC26A8-006	3144	865aa	ENSP00000378100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4814	Q96RN1	NM_138718.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480663.1	SLC26A8-007	582	190aa	ENSP00000420488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465492.1	SLC26A8-002	2104	320aa	ENSP00000418107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469847.1	SLC26A8-008	740	184aa	ENSP00000419700.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486155.1	SLC26A8-004	2989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466805.1	SLC26A8-003	2876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 2,876 bps,

Version

ENST00000466805.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000040327 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000466805.1 SLC26A8-003

Summary