Transcript: ENST00000526070.2 DDX6-002

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:HGNC Symbol;Acc:2747]

Gene Synonyms

HLR2, P54, RCK

Location

Chromosome 11: 118,625,298-118,661,657 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 19058 variant alleles and maps to 321 oligo probes.

Gene

This transcript is a product of gene ENSG00000110367.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264018.4	DDX6-001	4538	483aa	ENSP00000264018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_004397.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534980.1	DDX6-201	2541	483aa	ENSP00000442266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526070.2	DDX6-002	1936	483aa	ENSP00000433704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_001257191.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531971.1	DDX6-006	4373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529162.1	DDX6-004	1795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525082.1	DDX6-003	1232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533239.1	DDX6-005	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,936 bps, Translation length: 483 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26196

CCDS

This transcript is a member of the Human CCDS set: CCDS44751

Version

ENST00000526070.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389647 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000526070.2 DDX6-002

Summary