Transcript: ENST00000525082.1 DDX6-003

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:HGNC Symbol;Acc:2747]

Gene Synonyms

HLR2, P54, RCK

Location

Chromosome 11: 118,638,335-118,661,845 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 12392 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000110367.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264018.4	DDX6-001	4538	483aa	ENSP00000264018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_004397.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534980.1	DDX6-201	2541	483aa	ENSP00000442266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526070.2	DDX6-002	1936	483aa	ENSP00000433704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_001257191.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531971.1	DDX6-006	4373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529162.1	DDX6-004	1795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525082.1	DDX6-003	1232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533239.1	DDX6-005	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,232 bps,

Version

ENST00000525082.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389648 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000525082.1 DDX6-003

Summary