Transcript: ENST00000583369.1 SLC9A3R1-006

Description

solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 [Source:HGNC Symbol;Acc:11075]

Gene Synonyms

EBP50, NHERF, NHERF-1, NHERF1, NPHLOP2

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 9134 variant alleles and maps to 320 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262613.5	SLC9A3R1-001	1969	358aa	ENSP00000262613.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11705	B3KY21 O14745	NM_004252.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413388.2	SLC9A3R1-002	1285	202aa	ENSP00000464982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583369.1	SLC9A3R1-006	841	215aa	ENSP00000464321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581356.1	SLC9A3R1-005	519	35aa	ENSP00000464117.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578958.1	SLC9A3R1-004	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 841 bps, Translation length: 215 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000583369.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000443670 (version 1)