Transcript: ENST00000489697.1 RAI1-004

Description

retinoic acid induced 1 [Source:HGNC Symbol;Acc:9834]

Gene Synonyms

DKFZP434A139, KIAA1820, MGC12824, SMCR, SMS

Location

Chromosome 17: 17,585,043-17,588,364 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2110 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSG00000108557.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000353383.1	RAI1-001	7662	1906aa	ENSP00000323074.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11188	A8MXE8 J3QLL5 Q7Z5J4	NM_030665.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261641.6	RAI1-201	4923	1640aa	ENSP00000261641.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MXE8 E7EVZ3 J3QLL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395774.1	RAI1-002	2928	942aa	ENSP00000379120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MXE8 J3QLL5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471135.2	RAI1-006	570	65aa	ENSP00000463607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLL5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583166.1	RAI1-008	489	156aa	ENSP00000463984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489697.1	RAI1-004	1570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582514.1	RAI1-009	878	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,570 bps,

Version

ENST00000489697.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000131778 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000489697.1 RAI1-004

Summary